2002-05-02  Katja Schuerer  <schuerer@pasteur.fr>

	* src/prose.c: change pattern reporting, prose reports now not
	only the longest match of the pattern (as normal when searching
	regular expression) but can report the longest, the shortest
	(default) or all submatches

2002-02-12  Katja Schuerer  <schuerer@pasteur.fr>

	* src/prose.c: 
	* src/getpara.c: add -d option to print the ID + DO documentation
	instead of the pattern AC number
	

2001-11-15  Katja Schuerer  <schuerer@pasteur.fr>

	* src/fasta.c:  change sequence reading to jump empty lines

2001-10-16  Katja Schuerer  <schuerer@pasteur.fr>

	* src/prose.c: by default no verification of all pattern and
	search case-insensitive, add options to verify all pattern and
	search case-sensitive
	* src/prose.c: add options to search directly with regex pattern
	not documented in the manpage
	

